Differential diagnosis
















There are many ways to categorize the differential diagnosis of neonatal cholestasis. The table at the right presents diagnoses by frequency of occurrence. The most common individual causes are biliary atresia and neonatal hepatitis. The diagnosis of "idiopathic neonatal hepatitis" was and remains a catch-all term for otherwise undiagnosed neonatal cholestasis. Over the past 20 years, as more genetic, metabolic and specific infectious etiologies have been defined, the size of this group has declined by more than half.
Frequency of Causes
of Neonatal Cholestasis
Biliary atresia 25-30%
Intrahepatic cholestasis 20%
(Alagille, PFIC, etc)
Idiopathic neonatal hepatitis 15%
Alpha-1-antitrypsin deficiency 5-15%
Infectious/bacterial 5-10%
(sepsis, TORCH)
Inborn errors of bile acid synthesis 2-5%
Endocrine/metabolic 2-5%
One can also categorize cholestatic diseases by intrahepatic vs extrahepatic or obstructive vs hepatocellular. However one organizes the list, though, remember that only 15 or so diseases account for 95% of the cases.


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